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SRX2160868: Mycosphaerella graminicola
1 ILLUMINA (Illumina Genome Analyzer II) run: 9M spots, 350.2M bases, 240.7Mb downloads

External Id: JGI-SRA-69496
Submitted by: DOE Joint Genome Institute (JGI)
Study: WGS sequencing, assembly, and annotation
show Abstracthide Abstract
The <a href="http://genome.jgi-psf.org/Mycgr1/Mycgr1.home.html">Department of Energy (DOE) Joint Genome Institute (JGI)</a>, in collaboration with the <a href="http://www.ars.usda.gov/is/pr/2005/050331.htm">USDA - Agricultural Research Service</a> and <a href="http://www.pri.wur.nl/UK/">Plant Research International</a>, sequenced the <i>Mycosphaerella graminicola </i> strain IPO323 genome at 8.9X coverage using whole genome shotgun (WGS) sequencing. The genome was annotated using both automated and manual methods. The <i>M. graminicola</i> genome is being finished at the <a href="http://www-shgc.stanford.edu/information/index.html">Stanford Human Genome Center (SHGC)</a>. The <i>M. graminicola</i> isolate IPO323 is a Dutch field strain that was isolated in 1984 from the wheat cultivar Arminda.
Sample: Mycosphaerella graminicola IPO323
SAMN02746078 • SRS1689540 • All experiments • All runs
Library:
Name: FTTB
Instrument: Illumina Genome Analyzer II
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Construction protocol: Solexa
Runs: 1 run, 9M spots, 350.2M bases, 240.7Mb
Run# of Spots# of BasesSizePublished
SRR42398768,978,745350.2M240.7Mb2016-09-12

ID:
3155648

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